Mapped reads for uncultivated Maribacter bacterium UBA8082 genome rec... - SRA

SRX3576119: Mapped reads for uncultivated Maribacter bacterium UBA8082 genome recovered from ERX552244
1 ILLUMINA (Illumina HiSeq 2000) run: 244,007 spots, 47.5M bases, 22.8Mb downloads

Design: Reads from ERX552244 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA8082 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

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Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Maribacter bacterium UBA8082 genome recovered from ERX552244

SAMN08017564 • SRS2846003 • All experiments • All runs

Organism: Maribacter sp.

Library:

Name: UBA8082_library

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 244,007 spots, 47.5M bases, 22.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR6486288	244,007	47.5M	22.8Mb	2018-02-23

ID:: 4961621

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Sequence Read Archive

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